Jobs which commit their work to S3 thr
magic committer now use a unique magic
containing the job ID:
__magic_job-${jobid}
This allows for multiple jobs to write
to the same destination simultaneously.
Contributed by Syed Shameerur Rahman
* The multipart flag fs.s3a.multipart.uploads.enabled is passed to the async client created
* s3A connector bypasses the transfer manager entirely if disabled or for small files.
Contributed by Steve Loughran
This patch migrates the S3A connector to use the V2 AWS SDK.
This is a significant change at the source code level.
Any applications using the internal extension/override points in
the filesystem connector are likely to break.
This includes but is not limited to:
- Code invoking methods on the S3AFileSystem class
which used classes from the V1 SDK.
- The ability to define the factory for the `AmazonS3` client, and
to retrieve it from the S3AFileSystem. There is a new factory
API and a special interface S3AInternals to access a limited
set of internal classes and operations.
- Delegation token and auditing extensions.
- Classes trying to integrate with the AWS SDK.
All standard V1 credential providers listed in the option
fs.s3a.aws.credentials.provider will be automatically remapped to their
V2 equivalent.
Other V1 Credential Providers are supported, but only if the V1 SDK is
added back to the classpath.
The SDK Signing plugin has changed; all v1 signers are incompatible.
There is no support for the S3 "v2" signing algorithm.
Finally, the aws-sdk-bundle JAR has been replaced by the shaded V2
equivalent, "bundle.jar", which is now exported by the hadoop-aws module.
Consult the document aws_sdk_upgrade for the full details.
Contributed by Ahmar Suhail + some bits by Steve Loughran
Adds a class DelegationBindingInfo which contains binding info
beyond just the AWS credential list.
The binding class can be expanded when needed. Until then, all existing
implementations will work, as the new method
DelegationBindingInfo deploy(AbstractS3ATokenIdentifier retrievedIdentifier)
falls back to the original methods.
This modifies the manifest committer so that the list of files
to rename is passed between stages as a file of
writeable entries on the local filesystem.
The map of directories to create is still passed in memory;
this map is built across all tasks, so even if many tasks
created files, if they all write into the same set of directories
the memory needed is O(directories) with the
task count not a factor.
The _SUCCESS file reports on heap size through gauges.
This should give a warning if there are problems.
Contributed by Steve Loughran
This
1. changes the default value of fs.s3a.directory.marker.retention
to "keep"
2. no longer prints a message when an S3A FS instances is
instantiated with any option other than delete.
Switching to marker retention improves performance
on any S3 bucket as there are no needless marker DELETE requests
-leading to a reduction in write IOPS and and any delays waiting
for the DELETE call to finish.
There are *very* significant improvements on versioned buckets,
where tombstone markers slow down LIST operations: the more
tombstones there are, the worse query planning gets.
Having versioning enabled on production stores is the foundation
of any data protection strategy, so this has tangible benefits
in production.
It is *not* compatible with older hadoop releases; specifically
- Hadoop branch 2 < 2.10.2
- Any release of Hadoop 3.0.x and Hadoop 3.1.x
- Hadoop 3.2.0 and 3.2.1
- Hadoop 3.3.0
Incompatible releases have no problems reading data in stores
where markers are retained, but can get confused when deleting
or renaming directories.
If you are still using older versions to write to data, and cannot
yet upgrade, switch the option back to "delete"
Contributed by Steve Loughran
This:
1. Adds optLong, optDouble, mustLong and mustDouble
methods to the FSBuilder interface to let callers explicitly
passin long and double arguments.
2. The opt() and must() builder calls which take float/double values
now only set long values instead, so as to avoid problems
related to overloaded methods resulting in a ".0" being appended
to a long value.
3. All of the relevant opt/must calls in the hadoop codebase move to
the new methods
4. And the s3a code is resilient to parse errors in is numeric options
-it will downgrade to the default.
This is nominally incompatible, but the floating-point builder methods
were never used: nothing currently expects floating point numbers.
For anyone who wants to safely set numeric builder options across all compatible
releases, convert the number to a string and then use the opt(String, String)
and must(String, String) methods.
Contributed by Steve Loughran
Explicitly sets the fs.s3a.endpoint.region to eu-west-1 so
the ARN-referenced fs creation fails with unknown store
rather than IllegalArgumentException.
Steve Loughran
This has triggered an OOM in a process which was churning through s3a fs
instances; the increased memory footprint of IOStatistics amplified what
must have been a long-standing issue with FS instances being created
and not closed()
* Makes sure instrumentation is closed when the FS is closed.
* Uses a weak reference from metrics to instrumentation, so even
if the FS wasn't closed (see HADOOP-18478), this back reference
would not cause the S3AInstrumentation reference to be retained.
* If S3AFileSystem is configured to log at TRACE it will log the
calling stack of initialize(), so help identify where the
instance is being created. This should help track down
the cause of instance leakage.
Contributed by Steve Loughran.
This fixes a race condition with the TemporaryAWSCredentialProvider
one which has existed for a long time but which only surfaced
(usually in Spark) when the bucket existence probe was disabled
by setting fs.s3a.bucket.probe to 0 -a performance speedup
which was made the default in HADOOP-17454.
Contributed by Jimmy Wong.
The option "fs.s3a.proxy.ssl.enabled" controls
whether the s3a connects to a proxy over HTTP (default) or HTTPS.
Set to "true" to use HTTPS.
Contributed by Mehakmeet Singh
The AWS SDKV2 upgrade log no longer warns about instantiation
of the v1 SDK credential providers which are commonly used in
s3a configurations:
* com.amazonaws.auth.EnvironmentVariableCredentialsProvider
* com.amazonaws.auth.EC2ContainerCredentialsProviderWrapper
* com.amazonaws.auth.InstanceProfileCredentialsProvider
When the hadoop-aws module moves to the v2 SDK, references to these
credential providers will be rewritten to their v2 equivalents.
Follow-on to HADOOP-18382. "Upgrade AWS SDK to V2 - Prerequisites"
Contributed by Ahmar Suhail
Make S3APrefetchingInputStream.seek() completely lazy. Calls to seek() will not affect the current buffer nor interfere with prefetching, until read() is called.
This change allows various usage patterns to benefit from prefetching, e.g. when calling readFully(position, buffer) in a loop for contiguous positions the intermediate internal calls to seek() will be noops and prefetching will have the same performance as in a sequential read.
Contributed by Alessandro Passaro.
part of HADOOP-18103.
Also introducing a config fs.s3a.vectored.active.ranged.reads
to configure the maximum number of number of range reads a
single input stream can have active (downloading, or queued)
to the central FileSystem instance's pool of queued operations.
This stops a single stream overloading the shared thread pool.
Contributed by: Mukund Thakur
part of HADOOP-18103.
While merging the ranges in CheckSumFs, they are rounded up based on the
value of checksum bytes size which leads to some ranges crossing the EOF
thus they need to be fixed else it will cause EOFException during actual reads.
Contributed By: Mukund Thakur
Follow-up to HADOOP-12020 Support configuration of different S3 storage classes;
S3 storage class is now set when buffering to heap/bytebuffers, and when
creating directory markers
Contributed by Monthon Klongklaew
HADOOP-16202 "Enhance openFile()" added asynchronous draining of the
remaining bytes of an S3 HTTP input stream for those operations
(unbuffer, seek) where it could avoid blocking the active
thread.
This patch fixes the asynchronous stream draining to work and so
return the stream back to the http pool. Without this, whenever
unbuffer() or seek() was called on a stream and an asynchronous
drain triggered, the connection was not returned; eventually
the pool would be empty and subsequent S3 requests would
fail with the message "Timeout waiting for connection from pool"
The root cause was that even though the fields passed in to drain() were
converted to references through the methods, in the lambda expression
passed in to submit, they were direct references
operation = client.submit(
() -> drain(uri, streamStatistics,
false, reason, remaining,
object, wrappedStream)); /* here */
Those fields were only read during the async execution, at which
point they would have been set to null (or even a subsequent read).
A new SDKStreamDrainer class peforms the draining; this is a Callable
and can be submitted directly to the executor pool.
The class is used in both the classic and prefetching s3a input streams.
Also, calling unbuffer() switches the S3AInputStream from adaptive
to random IO mode; that is, it is considered a cue that future
IO will not be sequential, whole-file reads.
Contributed by Steve Loughran.
This patch prepares the hadoop-aws module for a future
migration to using the v2 AWS SDK (HADOOP-18073)
That upgrade will be incompatible; this patch prepares
for it:
-marks some credential providers and other
classes and methods as @deprecated.
-updates site documentation
-reduces the visibility of the s3 client;
other than for testing, it is kept private to
the S3AFileSystem class.
-logs some warnings when deprecated APIs are used.
The warning messages are printed only once
per JVM's life. To disable them, set the
log level of org.apache.hadoop.fs.s3a.SDKV2Upgrade
to ERROR
Contributed by Ahmar Suhail
This is the the preview release of the HADOOP-18028 S3A performance input stream.
It is still stabilizing, but ready to test.
Contains
HADOOP-18028. High performance S3A input stream (#4109)
Contributed by Bhalchandra Pandit.
HADOOP-18180. Replace use of twitter util-core with java futures (#4115)
Contributed by PJ Fanning.
HADOOP-18177. Document prefetching architecture. (#4205)
Contributed by Ahmar Suhail
HADOOP-18175. fix test failures with prefetching s3a input stream (#4212)
Contributed by Monthon Klongklaew
HADOOP-18231. S3A prefetching: fix failing tests & drain stream async. (#4386)
* adds in new test for prefetching input stream
* creates streamStats before opening stream
* updates numBlocks calculation method
* fixes ITestS3AOpenCost.testOpenFileLongerLength
* drains stream async
* fixes failing unit test
Contributed by Ahmar Suhail
HADOOP-18254. Disable S3A prefetching by default. (#4469)
Contributed by Ahmar Suhail
HADOOP-18190. Collect IOStatistics during S3A prefetching (#4458)
This adds iOStatisticsConnection to the S3PrefetchingInputStream class, with
new statistic names in StreamStatistics.
This stream is not (yet) IOStatisticsContext aware.
Contributed by Ahmar Suhail
HADOOP-18379 rebase feature/HADOOP-18028-s3a-prefetch to trunk
HADOOP-18187. Convert s3a prefetching to use JavaDoc for fields and enums.
HADOOP-18318. Update class names to be clear they belong to S3A prefetching
Contributed by Steve Loughran
JobID.toString() and TaskID.toString() to only be called
when the IDs are not null.
This doesn't surface in MapReduce, but Spark SQL can trigger
in job abort, where it may invok abortJob() with an
incomplete TaskContext.
This patch MUST be applied to branches containing
HADOOP-17833. "Improve Magic Committer Performance."
Contributed by Steve Loughran.
jobId.toString() to only be called when the ID isn't null.
this doesn't surface in MR, but spark seems to manage it
Change-Id: I06692ef30a4af510c660d7222292932a8d4b5147
The name of the option to enable/disable thread level statistics is
"fs.iostatistics.thread.level.enabled";
There is also an enabled() probe in IOStatisticsContext which can
be used to see if the thread level statistics is active.
Contributed by Viraj Jasani
Fixes CVE-2018-7489 in shaded jackson.
+Add more commands in testing.md
to the CLI tests needed when qualifying
a release
Contributed by Steve Loughran
This adds a thread-level collector of IOStatistics, IOStatisticsContext,
which can be:
* Retrieved for a thread and cached for access from other
threads.
* reset() to record new statistics.
* Queried for live statistics through the
IOStatisticsSource.getIOStatistics() method.
* Queries for a statistics aggregator for use in instrumented
classes.
* Asked to create a serializable copy in snapshot()
The goal is to make it possible for applications with multiple
threads performing different work items simultaneously
to be able to collect statistics on the individual threads,
and so generate aggregate reports on the total work performed
for a specific job, query or similar unit of work.
Some changes in IOStatistics-gathering classes are needed for
this feature
* Caching the active context's aggregator in the object's
constructor
* Updating it in close()
Slightly more work is needed in multithreaded code,
such as the S3A committers, which collect statistics across
all threads used in task and job commit operations.
Currently the IOStatisticsContext-aware classes are:
* The S3A input stream, output stream and list iterators.
* RawLocalFileSystem's input and output streams.
* The S3A committers.
* The TaskPool class in hadoop-common, which propagates
the active context into scheduled worker threads.
Collection of statistics in the IOStatisticsContext
is disabled process-wide by default until the feature
is considered stable.
To enable the collection, set the option
fs.thread.level.iostatistics.enabled
to "true" in core-site.xml;
Contributed by Mehakmeet Singh and Steve Loughran
part of HADOOP-18103.
Handling memory fragmentation in S3A vectored IO implementation by
allocating smaller user range requested size buffers and directly
filling them from the remote S3 stream and skipping undesired
data in between ranges.
This patch also adds aborting active vectored reads when stream is
closed or unbuffer() is called.
Contributed By: Mukund Thakur
Part of HADOOP-18103.
Introducing fs.s3a.vectored.read.min.seek.size and fs.s3a.vectored.read.max.merged.size
to configure min seek and max read during a vectored IO operation in S3A connector.
These properties actually define how the ranges will be merged. To completely
disable merging set fs.s3a.max.readsize.vectored.read to 0.
Contributed By: Mukund Thakur
part of HADOOP-18103.
Add support for multiple ranged vectored read api in PositionedReadable.
The default iterates through the ranges to read each synchronously,
but the intent is that FSDataInputStream subclasses can make more
efficient readers especially in object stores implementation.
Also added implementation in S3A where smaller ranges are merged and
sliced byte buffers are returned to the readers. All the merged ranged are
fetched from S3 asynchronously.
Contributed By: Owen O'Malley and Mukund Thakur
Speed up the magic committer with key changes being
* Writes under __magic always retain directory markers
* File creation under __magic skips all overwrite checks,
including the LIST call intended to stop files being
created over dirs.
* mkdirs under __magic probes the path for existence
but does not look any further.
Extra parallelism in task and job commit directory scanning
Use of createFile and openFile with parameters which all for
HEAD checks to be skipped.
The committer can write the summary _SUCCESS file to the path
`fs.s3a.committer.summary.report.directory`, which can be in a
different file system/bucket if desired, using the job id as
the filename.
Also: HADOOP-15460. S3A FS to add `fs.s3a.create.performance`
Application code can set the createFile() option
fs.s3a.create.performance to true to disable the same
safety checks when writing under magic directories.
Use with care.
The createFile option prefix `fs.s3a.create.header.`
can be used to add custom headers to S3 objects when
created.
Contributed by Steve Loughran.
Adds a new option fs.s3a.create.storage.class which can
be used to set the storage class for files created in AWS S3.
Consult the documentation for details and instructions on how
disable the relevant tests when testing against third-party
stores.
Contributed by Monthon Klongklaew
This moves off use of the purged s3a://landsat-pds bucket, so fixing tests
which had started failing.
* Adds a new class, PublicDatasetTestUtils to manage the use of public datasets.
* The new test bucket s3a://usgs-landsat/ is requester pays, so depends upon
HADOOP-14661.
Consult the updated test documentation when running against other S3 stores.
Contributed by Daniel Carl Jones
Change-Id: Ie8585e4d9b67667f8cb80b2970225d79a4f8d257
This moves off use of the purged s3a://landsat-pds bucket, so fixing tests
which had started failing.
* Adds a new class, PublicDatasetTestUtils to manage the use of public datasets.
* The new test bucket s3a://usgs-landsat/ is requester pays, so depends upon
HADOOP-14661.
Consult the updated test documentation when running against other S3 stores.
Contributed by Daniel Carl Jones
S3A input stream support for the few fs.option.openfile settings.
As well as supporting the read policy option and values,
if the file length is declared in fs.option.openfile.length
then no HEAD request will be issued when opening a file.
This can cut a few tens of milliseconds off the operation.
The patch adds a new openfile parameter/FS configuration option
fs.s3a.input.async.drain.threshold (default: 16000).
It declares the number of bytes remaining in the http input stream
above which any operation to read and discard the rest of the stream,
"draining", is executed asynchronously.
This asynchronous draining offers some performance benefit on seek-heavy
file IO.
Contributed by Steve Loughran.
Change-Id: I9b0626bbe635e9fd97ac0f463f5e7167e0111e39
Adds the option fs.s3a.requester.pays.enabled, which, if set to true, allows
the client to access S3 buckets where the requester is billed for the IO.
Contributed by Daniel Carl Jones
Optimize the scan for s3 by performing a deep tree listing,
inferring directory counts from the paths returned.
Contributed by Ahmar Suhail.
Change-Id: I26ffa8c6f65fd11c68a88d6e2243b0eac6ffd024
Multi object delete of size more than 1000 is not supported by S3 and
fails with MalformedXML error. So implementing paging of requests to
reduce the number of keys in a single request. Page size can be configured
using "fs.s3a.bulk.delete.page.size"
Contributed By: Mukund Thakur
Adds a new map type WeakReferenceMap, which stores weak
references to values, and a WeakReferenceThreadMap subclass
to more closely resemble a thread local type, as it is a
map of threadId to value.
Construct it with a factory method and optional callback
for notification on loss and regeneration.
WeakReferenceThreadMap<WrappingAuditSpan> activeSpan =
new WeakReferenceThreadMap<>(
(k) -> getUnbondedSpan(),
this::noteSpanReferenceLost);
This is used in ActiveAuditManagerS3A for span tracking.
Relates to
* HADOOP-17511. Add an Audit plugin point for S3A
* HADOOP-18094. Disable S3A auditing by default.
Contributed by Steve Loughran.
Part of HADOOP-17198. Support S3 Access Points.
HADOOP-18068. "upgrade AWS SDK to 1.12.132" broke the access point endpoint
translation.
Correct endpoints should start with "s3-accesspoint.", after SDK upgrade they start with
"s3.accesspoint-" which messes up tests + region detection by the SDK.
Contributed by Bogdan Stolojan
See HADOOP-18091. S3A auditing leaks memory through ThreadLocal references
* Adds a new option fs.s3a.audit.enabled to controls whether or not auditing
is enabled. This is false by default.
* When false, the S3A auditing manager is NoopAuditManagerS3A,
which was formerly only used for unit tests and
during filsystem initialization.
* When true, ActiveAuditManagerS3A is used for managing auditing,
allowing auditing events to be reported.
* updates documentation and tests.
This patch does not fix the underlying leak. When auditing is enabled,
long-lived threads will retain references to the audit managers
of S3A filesystem instances which have already been closed.
Contributed by Steve Loughran.
